deepfold.data.search.parsers.parse_fasta

deepfold.data.search.parsers.parse_fasta(fasta_string: str) Tuple[Sequence[str], Sequence[str]][source]

Parses FASTA string and returns list of strings with amino-acid sequences.

Parameters:

fasta_string – The string contents of a FASTA file.

Returns:

  • A list of sequences.

  • A list of sequence descriptions taken from the comment lines.

    In the same order as the sequences.

Return type:

A tuple of two lists