bis_protein_structure.DATAGEN

Functions

create_structure_from_feature(sequence, ...)	Creates a structure from sequence and atomic position information.
generate_feature_dict(tag, seq, fasta_path, ...)	Generates a feature dictionary from the given sequence and alignment.
mmcif_to_pdbs(input_mmcif_file, output_pdb_root)	Converts an MMCIF file to separate PDB files for each chain.
parallel_processing(mmcifs, mmcif_root, ...)	Processes multiple MMCIF files in parallel and converts them to PDB files.
parse_fasta(data)	Parses the contents of a FASTA file and extracts sequence tags and sequences.
parse_mmcif(path, file_id, chain_id, ...)	Parses an MMCIF file and processes it into structured data.
process_mmcif_to_pdbs(mmcif, mmcif_root, ...)	Processes an MMCIF file and converts it to PDB format.
read_fasta(file_path)	Reads a FASTA file and prints out each sequence ID and sequence.

Classes

AllResiduesSelector(target_chain_id)

Selector class for PDBIO to select all residues in a specific chain.