bis_protein_structure.CROSSLINK

Functions

calculate_calpha_distogram(chain_id, chain, ...)	Calculates the C-alpha distogram for a protein chain.
calculate_lys_leu_map(chain_id, chain, ...)	Generates a binary map indicating the presence of Lysine (LYS) or Leucine (LEU) residues.
calculate_sa_map(chain_id, chain, ...)	Calculates the solvent accessibility (SA) map for a protein chain.
calculate_tryptic_map(chain_id, chain, ...)	Generates a tryptic map based on the presence of Lysine (LYS) or Arginine (ARG).
load_list_from_file(file_path)	Loads a list from a pickle file.
plot_cross_link(residue_length, distogram, ...)	Plots cross-linking analysis based on distance, LYS_LEU map, solvent accessibility, and tryptic map.
readMMCIF(mmcif_path)	Reads an MMCIF file and extracts chain and residue information.
readPDB(pdb_dir)	Reads a PDB file and extracts chain and residue information.