deepfold.losses.geometry

Functions

backbone_loss(backbone_rigid_tensor, ...[, ...])
compute_distogram(positions, mask[, ...])
compute_fape(pred_frames, target_frames, ...)	Computes FAPE loss.
compute_renamed_ground_truth(batch, ...[, eps])
distogram_loss(logits, pseudo_beta, ...[, ...])
fape_loss(outputs, batch, ...[, eps])
get_optimal_transform(src_atoms, tgt_atoms)	Calculate the optimal superimposition.
kabsch_rmsd(true_atom_pos, pred_atom_pos[, ...])
sidechain_loss(sidechain_frames, ...[, ...])
superimpose(src_atoms, tgt_atoms, mask)	Superimposes coordinates onto a tgt_atoms by minimizing RMSD using SVD.
supervised_chi_loss(angles_sin_cos, ...[, eps])	Torsion Angle Loss.