deepfold.losses.violation

Functions

between_residue_bond_loss(...[, ...])	Flat-bottom loss to penalize structural violations between residues.
between_residue_clash_loss(...[, ...])	Loss to penalize steric clashes between residues.
compute_violation_metrics(batch, ...)	Compute several metrics to assess the structural violations.
compute_violation_metrics_np(batch, ...)
extreme_ca_ca_distance_violations(...[, ...])	Counts residues whose Ca is a large distance from its neighbour.
find_structural_violations(batch, ...)	Computes several checks for structural violations.
find_structural_violations_np(batch, ...)
violation_loss(violations, atom14_atom_exists)
within_residue_violations(...[, ...])	Loss to penalize steric clashes within residues.